EBV-ralated Dataset Summary

This module is dedicated to providing researchers with comprehensive and detailed virus-related omics data from the public databases. The current version brings together virus related transcriptome, epigenome and genome data. The experiment types include: Expression profiling by high throughput sequencing/array, Methylation profiling by high throughput sequencing/array/genome tiling array, Genome binding/occupancy profiling by genome tiling array and Genome variation profiling by high throughput sequencing, etc.
The following labels indicate that this dataset has analysis data/figure/literature.
X
 xCell analysis  
E
 Differential expression analysis  
M
 Differential methylation analysis  
C
 Genome binding/occupancy profiling analysis  
S
 scRNA analysis  
L
 Literature  


Dataset Summary
Accession Virus Title Experiment Type Platform ID Samples Data Availability Detail
GSE198332 Epstein-Barr(EBV) Repression of DERL3 via DNA methylation by Epstein-Barr virus latent membrane protein 1 in nasopharyngeal carcinoma [methylation data] Methylation profiling (Array) GPL21145 7
M
L
Detail
GSE198334 Epstein-Barr(EBV) Repression of DERL3 via DNA methylation by Epstein-Barr virus latent membrane protein 1 in nasopharyngeal carcinoma [ChIP-seq] Chip-seq GPL18573 4
C
L
Detail
GSE225248 Epstein-Barr(EBV) Enhancer infestation drives tumorigenic activation of inactive compartment in Epstein-Barr virus-positive nasopharyngeal carcinoma [ChIP-Seq] Chip-seq GPL18573 12
C
L
Detail
GSE233426 Epstein-Barr(EBV) NPC268 whole-genome bisulfite sequencing (WGBS) Whole-genome bisulfite sequencing (WGBS) GPL24676 1
L
Detail
GSE246059 Epstein-Barr(EBV) Shared and distinct interactions of Epstein-Barr Nuclear Antigen 2 type 1 and type 2 with the human genome (ATAC-Seq) ATAC-seq GPL18573
GPL24676
8
C
L
Detail
GSE246060 Epstein-Barr(EBV) Shared and distinct interactions of Epstein-Barr Nuclear Antigen 2 type 1 and type 2 with the human genome (ChIP-Seq) Chip-seq GPL24676 26
C
L
Detail

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