HIV Target gene Detail Information

> UBE2H Gene Search Result


Gene Information
Gene Name UBE2H
Gene ID 7328
Gene Full Name ubiquitin conjugating enzyme E2 H
Gene Alias E2-20K|GID3|UBC8|UBCH|UBCH2
Transcripts ENSG00000186591
Virus HIV
Gene Type protein-coding
HPA Location Info Mitochondria;
Membrane Info Enzymes, Metabolic proteins, Predicted intracellular proteins
Uniport_ID P62256
HGNC ID HGNC:12484
OMIM ID 601082
Summary The modification of proteins with ubiquitin is an important cellular mechanism for targeting abnormal or short-lived proteins for degradation. Ubiquitination involves at least three classes of enzymes: ubiquitin-activating enzymes, or E1s, ubiquitin-conjugating enzymes, or E2s, and ubiquitin-protein ligases, or E3s. This gene encodes a member of the E2 ubiquitin-conjugating enzyme family. The encoded protein sequence is 100% identical to the mouse homolog and 98% identical to the frog and zebrafish homologs. Three alternatively spliced transcript variants have been found for this gene and they encode distinct isoforms. [provided by RefSeq, Feb 2011]
Target gene [UBE2H] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4001029 chr7 90 132 6 228 View
4002911 chr7 71 4 0 75 View
4003899 chr7 42 10 1 53 View
4003900 chr7 42 10 1 53 View
4004354 chr7 35 10 1 46 View
4006836 chr7 18 4 0 22 View
4008289 chr7 8 8 0 16 View
4008290 chr7 8 8 0 16 View
4008837 chr7 11 2 1 14 View
4009765 chr7 8 3 0 11 View
4009766 chr7 9 2 0 11 View
4009767 chr7 9 2 0 11 View
4009768 chr7 9 2 0 11 View

Target gene [UBE2H] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE221688
Chip-seq;scATAC-Seq;scRNA-Seq 12 Illumina NovaSeq 6000 (Homo sapiens)
GSE99737 RNA-seq 9 Illumina HiSeq 2500 (Homo sapiens)
GSE144332 RNA-seq 75 NextSeq 550 (Homo sapiens)
GSE157829 scRNA-seq 7 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE165705
Chip-seq 30 Illumina NovaSeq 6000 (Homo sapiens)
GSE164264 RNA-seq 6 BGISEQ-500 (Homo sapiens)
C
  GSE30738
Chip-seq 2 Illumina Genome Analyzer II (Homo sapiens)
GSE262621 RNA-seq 70 Illumina NovaSeq 6000 (Homo sapiens)
GSE128121 RNA-seq 16 Illumina HiSeq 4000 (Homo sapiens)
GSE162914 RNA-seq 211 Illumina HiSeq 2500 (Homo sapiens)
GSE279982 Methylation profiling (Array) 576 Infinium MethylationEPIC
C
  GSE144329
ATAC-seq 96 NextSeq 550 (Homo sapiens)
GSE205204 RNA-seq 14 Illumina NovaSeq 6000 (Homo sapiens)
GSE125686 RNA-seq 62 Illumina HiSeq 2000 (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
C
  GSE220859
Chip-seq 11 Illumina NovaSeq 6000 (Homo sapiens)
GSE165708 RNA-seq 100 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE211651
Chip-seq;RNA-seq;PRO-seq 39 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE68028 MeDIP-chip 1 NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100929_HG19_Deluxe_Prom_Meth_HX1]
C
  GSE100376
ATAC-seq 24 Illumina NextSeq 500 (Homo sapiens)
GSE167211 RNA-seq 1 Illumina HiSeq 2000 (Homo sapiens)
GSE165132 RNA-seq 56 NextSeq 550 (Homo sapiens)
C
  GSE100266
ATAC-seq;Chip-seq;RNA-seq 32 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE165703
ATAC-seq 82 Illumina HiSeq 4000 (Homo sapiens)
GSE148796 scRNA-seq 4 Illumina NextSeq 500 (Homo sapiens)
GSE246082 RNA-seq 6 Illumina HiSeq 4000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE221688 - UBE2H peak across samples

Peak Plot


> Dataset: GSE165705 - UBE2H peak across samples

Peak Plot


> Dataset: GSE30738 - UBE2H peak across samples

Peak Plot


> Dataset: GSE144329 - UBE2H peak across samples

Peak Plot


> Dataset: GSE220859 - UBE2H peak across samples

Peak Plot


> Dataset: GSE211651 - UBE2H peak across samples

Peak Plot


> Dataset: GSE100376 - UBE2H peak across samples

Peak Plot


> Dataset: GSE100266 - UBE2H peak across samples

Peak Plot


> Dataset: GSE165703 - UBE2H peak across samples

Peak Plot