Overview of SARS-CoV-2 Mutation, Integration-Cistrome Factor Overlap and Target gene

Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) is a strain of coronavirus that causes COVID-19, the respiratory illness responsible for the COVID-19 pandemic.
Size: 30kb
Encoding: N, 3CLpro, E, M, Mpro, NSP12, NSP13, NSP14, NSP15, NSP2, NSP3, NSP4, NSP5, NSP6, NSP7, NSP8, ORF1a, ORF1ab, ORF1b, ORF3a, ORF6, ORF7a, ORF8, PLpro, RBD, RdRp, S, etc.
Human Disease: COVID-19, etc.
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SARS-CoV-2 Mutation Info

Click here to see all SARS-CoV-2 Mutation Sites

ID	PMID	Mutation	Gene/Protein/Region	Encoding Gene/Protein	Disease	Description	Detail
1	37153142	D405N	S	S	COVID-19	G R S I	View
2	37153142	T95I	S	S	COVID-19	G R S I	View
3	37243229	R346T	RBD	S	COVID-19	G S	View
4	37529147	Q954H	S	S	COVID-19	G R S L	View
5	34403732	Y453F	S	S	Cell line		View
6	34433426	D614G	S	S	Cell line		View
7	34445669	D614G	S	S	Cell line		View
8	34467913	A222V	S	S	Cell line	R S L	View
9	34467913	P521S	S	S	Cell line	R S L	View
10	36149962	N61Q	S	S	Cell line		View
11	36149962	N801Q	S	S	Cell line		View
12	36149962	D614G	S	S	Cell line		View
13	36149962	N603Q	S	S	Cell line		View
14	36149962	N616Q	S	S	Cell line		View
15	37529147	T19I	S	S	COVID-19	G R S L	View
16	36149962	N657Q	S	S	Cell line		View
17	36153659	A892P	S	S	Cell line		View
18	36153659	A899P	S	S	Cell line		View
19	36153659	A942P	S	S	Cell line		View
20	36153659	E484K	S	S	Cell line		View
21	36153659	E484Q	S	S	Cell line		View
22	36153659	F817P	S	S	Cell line		View
23	36153659	K417N	S	S	Cell line		View
24	36153659	K417T	S	S	Cell line		View
25	36153659	K986P	S	S	Cell line		View
26	39286971	P681R	S	S	COVID-19	D G L	View
27	36153659	L452R	S	S	Cell line		View
28	36153659	R683A	S	S	Cell line		View
29	36153659	R685A	S	S	Cell line		View
30	36153659	T478K	S	S	Cell line		View
31	36153659	V987P	S	S	Cell line		View
32	36204651	D614G	S	S	Cell line		View
33	36563151	D614G	S	S	Cell line	R	View
34	36590900	N317P	S	S	Cell line		View
35	37809871	L452Q	S	S	Cell line		View
36	37809871	L452R	S	S	Cell line		View
37	39772187	A27S	S	S	COVID-19	G L	View
38	37809871	F490S	S	S	Cell line		View
39	37809871	N501N	S	S	Cell line		View
40	37809871	N501Y	S	S	Cell line		View
41	37809871	S477N	S	S	Cell line		View
42	37809871	Y453F	S	S	Cell line		View
43	37929963	D614G	S	S	Cell line	R T	View
44	37963924	D614G	S	S	Cell line		View
45	33968806	D614G	S	S	Cell line		View
46	40253323	M1237I	S	S	Cell line	R	View
47	39657661	D215G	S	S	Cell line		View
48	39772187	L212I	S	S	COVID-19	G L	View
49	39657661	D614G	S	S	Cell line		View
50	39657661	D80A	S	S	Cell line		View
51	39657661	F486P	S	S	Cell line	I	View
52	39657661	G252V	S	S	Cell line	I	View
53	39657661	G339D	S	S	Cell line	I	View
54	39657661	G339H	S	S	Cell line	I	View
55	39657661	H655Y	S	S	Cell line		View
56	39657661	R214insEPE	S	S	Cell line	I	View
57	39657661	K417T	S	S	Cell line	I	View
58	39657661	L368I	S	S	Cell line	I	View
59	39772187	Y145D	S	S	COVID-19	G L	View
60	39657661	M1229I	S	S	Cell line	I	View
61	39657661	N460K	S	S	Cell line		View
62	39657661	P26S	S	S	Cell line	I	View
63	39657661	Q677H	S	S	Cell line		View
64	39657661	S477N	S	S	Cell line	I	View
65	39657661	T572I	S	S	Cell line		View
66	39657661	V1176F	S	S	Cell line	I	View
67	39657661	V213E	S	S	Cell line	I	View
68	39657661	V445P	S	S	Cell line	I	View
69	39657661	Y453F	S	S	Cell line	I	View
70	39881253	G446S	S	S	COVID-19	G L	View
71	38548763	T323I	S	S	Cell line	I L	View
72	38548763	K529N	S	S	Cell line	I L	View
73	38548763	T547I	S	S	Cell line	I L	View
74	38548763	T547K	S	S	Cell line	I L	View
75	38548763	E554K	S	S	Cell line	I L	View
76	38548763	N556K	S	S	Cell line	I L	View
77	38548763	L560Q	S	S	Cell line	I L	View
78	38548763	A570D	S	S	Cell line	I L	View
79	38548763	A570V	S	S	Cell line	I L	View
80	38548763	T572I	S	S	Cell line	I L	View
81	36731147	Q493R	S	S	COVID-19	D G C	View
82	38548763	T573I	S	S	Cell line	I L	View
83	38548763	E583D	S	S	Cell line	I L	View
84	37382441	D614G	S	S	Cell line	R	View
85	34226895	D614G	S	S	Cell line		View
86	34226895	E484K	S	S	Cell line		View
87	34226895	K417N	S	S	Cell line		View
88	34226895	N501Y	S	S	Cell line		View
89	34214467	E484D	S	S	Cell line	R S	View
90	34228597	D614G	S	S	Cell line		View
91	34228597	E484K	S	S	Cell line	I	View
92	36731147	F486V	S	S	COVID-19	D G C	View
93	34228597	N501Y	S	S	Cell line	I	View
94	34228597	S477N	S	S	Cell line	I	View
95	34985974	D614G	S	S	Cell line		View
96	32756549	D614G	S	S	Cell line		View
97	34464596	F486P	S	S	Cell line	I	View
98	34464596	F486V	S	S	Cell line	I	View
99	34464596	G476D	S	S	Cell line	I	View
100	34464596	G476S	S	S	Cell line	I	View

Contents
Description

The table shows all curated mutation sites of SARS-CoV-2 in each literature

Table Description Column Note

D
The study mentioned a certain treatment method, such as drug resistance caused by mutations.

G
The study mentioned the virus genotype/subtype information.

R
The study mentioned the reference sequence used for comparison, or the original strain of the virus used for site-directed mutagenesis.

S
The study provided sequence information or accession numbers.

L
The study provided the geographic region/country of data origin.

C
The study provided clinical baseline information.

I
The study involved information related to immune.

T
The study involved host target genes.

SARS-CoV-2 Target Gene Info

Only show 100 info Click here to see all SARS-CoV-2 Target Gene

ID	Target gene	Virus	Impact	Literature Count	Description	Detail
1	ACE2	SARS-CoV-2	M	28	E	View
2	ADAM9	SARS-CoV-2	M	1	E S C	View
3	CD8A	SARS-CoV-2	M	1	E S	View
4	COL6A1	SARS-CoV-2	M	1	E S	View
5	DPP4	SARS-CoV-2	M	1	E S C	View
6	FBXL12	SARS-CoV-2	M	1	E	View
7	FCGRT	SARS-CoV-2	M	1	E S	View
8	FKBP10	SARS-CoV-2	M	1	E S	View
9	FURIN	SARS-CoV-2	M	1	E S C	View
10	GDF15	SARS-CoV-2	M	1	E S C	View
11	GIGYF2	SARS-CoV-2	M	1	E S C	View
12	GOLGA7	SARS-CoV-2	M	1	E S C	View
13	HDAC2	SARS-CoV-2	M	1	E S C	View
14	HLA-A	SARS-CoV-2	M	1	E S	View
15	HLA-B	SARS-CoV-2	M	1	E S	View
16	HLA-C	SARS-CoV-2	M	1	E S	View
17	HS6ST2	SARS-CoV-2	M	1	E S C	View
18	IFNB1	SARS-CoV-2	M	1	E C	View
19	IL17RA	SARS-CoV-2	M	1	E S	View
20	KPNA2	SARS-CoV-2	M	1	E S	View
21	LOX	SARS-CoV-2	M	1	E S	View
22	MARVELD2	SARS-CoV-2	M	1	E	View
23	NEU1	SARS-CoV-2	M	1	E S	View
24	PLAT	SARS-CoV-2	M	1	E S	View
25	PLD3	SARS-CoV-2	M	1	E S	View
26	PLOD2	SARS-CoV-2	M	1	E S C	View
27	RIGI	SARS-CoV-2	M	1	E C	View
28	SERINC5	SARS-CoV-2	M	1	E S C	View
29	TBK1	SARS-CoV-2	M	1	E S C	View
30	TMPRSS2	SARS-CoV-2	M	1	E S C	View
31	ZDHHC5	SARS-CoV-2	M	1	E S	View

Contents Description and
Data Download

Table Note

I
Target gene is affected by virus integration.

M
Target gene is associated with the virus gene/protein/region.

E
Target gene is detected in the expression profiling data.

S
Target gene is detected in the single-cell transcriptome data.

C
Target gene is detected in the genome binding/occupancy profiling data.

M
Target gene is detected in the methylation profiling data.

F
Target gene provides figures to visualize the analysis results.
F indicates that this gene has visualization results on at least one type of sequencing data.