Overview of XMRV Mutation, Integration-Cistrome Factor Overlap and Target gene

Xenotropic Murine Leukemia Virus-Related Virus (XMRV) is a gammaretrovirus linked to prostate carcinoma and chronic fatigue syndrome.
Size: 8.3kb
Encoding: RT, etc.
Human Disease: Prostatic Neoplasms, etc.
Click the View button on the page to view detailed information.


XMRV Mutation Info
Only show 100 info Click here to see all XMRV Mutation Sites
ID PMID Mutation Gene/Protein/Region Encoding Gene/Protein Disease Description Detail
1 21908397 K103R
RT
pol
Cell line
D
R
 View
2 21908397 Q190M
RT
pol
Cell line
D
R
 View
Contents
Description

The table shows all curated mutation sites of XMRV in each literature

Table Description Column Note
D
The study mentioned a certain treatment method, such as drug resistance caused by mutations.
G
The study mentioned the virus genotype/subtype information.
R
The study mentioned the reference sequence used for comparison, or the original strain of the virus used for site-directed mutagenesis.
S
The study provided sequence information or accession numbers.
L
The study provided the geographic region/country of data origin.
C
The study provided clinical baseline information.
I
The study involved information related to immune.
T
The study involved host target genes.

XMRV Overlap Info between Viral Integration Fragments and Cistrome Factors
Click here to see all XMRV Integration Sites
DVID Chromosome Histone Modification Transcription Factor Binding Site Chromatin Accessibility Sum of Overlapped Records Detail
8000049 chr1 6079 4367 1478 11924 View
8000030 chr1 3008 3673 1779 8460 View
8000057 chr1 2407 616 127 3150 View
8000032 chr1 1313 203 19 1535 View
8000038 chr1 567 469 161 1197 View
8000006 chr1 316 17 19 352 View
8000015 chr1 26 12
0
 38 View
8000018 chr1 21 6
0
 27 View
8000028 chr1
0
0
0
 0 View

Click to see histogram of VIS-Factor Overlap by chromosome of XMRV

Click to see the overlap count of three factors and XMRV intergration fragments on the human chromosomes

XMRV Target Gene Info
Only show 100 info Click here to see all XMRV Target Gene
ID Target gene Virus Impact Literature Count Description Detail
1 APOL1 XMRV
I
 1 View
2 APP XMRV
I
 1 View
3 APPBP2 XMRV
I
 1 View
4 ATP6V0A1 XMRV
I
 1 View
5 B3GNT7 XMRV
I
 1 View
6 CAPZA2 XMRV
I
 1 View
7 CAV2 XMRV
I
 1 View
8 CBX1 XMRV
I
 1 View
9 CCDC71L XMRV
I
 1 View
10 CCDC9 XMRV
I
 1 View
11 COPZ2 XMRV
I
 1 View
12 CREB5 XMRV
I
 1 View
13 CYREN XMRV
I
 1 View
14 DAPK3 XMRV
I
 1 View
15 DDIT4 XMRV
I
 1 View
16 ECE2 XMRV
I
 1 View
17 EDN2 XMRV
I
 1 View
18 EEF1G XMRV
I
 1 View
19 EIF4G1 XMRV
I
 1 View
20 EMD XMRV
I
 1 View
21 ENO1-AS1 XMRV
I
 1 View
22 FAM41C XMRV
I
 1 View
23 FARSA XMRV
I
 1 View
24 FIGN XMRV
I
 1 View
25 FOXB1 XMRV
I
 1 View
26 FRMD8 XMRV
I
 1 View
27 FSIP1 XMRV
I
 1 View
28 GALK1 XMRV
I
 1 View
29 GCA XMRV
I
 1 View
30 GPN2 XMRV
I
 1 View
31 GPR52 XMRV
I
 1 View
32 H19 XMRV
I
 1 View
33 HAP1 XMRV
I
 1 View
34 ICE2 XMRV
I
 1 View
35 KRT6A XMRV
I
 1 View
36 KRT71 XMRV
I
 1 View
37 LAMA5 XMRV
I
 1 View
38 LCAT XMRV
I
 1 View
39 LINC02593 XMRV
I
 1 View
40 LINC02915 XMRV
I
 1 View
41 MET XMRV
I
 1 View
42 MIR124-1 XMRV
I
 1 View
43 MIR1256 XMRV
I
 1 View
44 MIR3190 XMRV
I
 1 View
45 MIR483 XMRV
I
 1 View
46 MIR612 XMRV
I
 1 View
47 MIR936 XMRV
I
 1 View
48 NAMPT XMRV
I
 1 View
49 NFATC3 XMRV
I
 1 View
50 OSBPL2 XMRV
I
 1 View
51 P3H4 XMRV
I
 1 View
52 PIK3C2B XMRV
I
 1 View
53 PRSS55 XMRV
I
 1 View
54 RAD23A XMRV
I
 1 View
55 RBPJ XMRV
I
 1 View
56 RC3H1 XMRV
I
 1 View
57 RERE XMRV
I
 1 View
58 RPLP0 XMRV
I
 1 View
59 SAP30BP XMRV
I
 1 View
60 SCGB1A1 XMRV
I
 1 View
61 SCMH1 XMRV
I
 1 View
62 SFR1 XMRV
I
 1 View
63 SIRT4 XMRV
I
 1 View
64 SLK XMRV
I
 1 View
65 SMIM20 XMRV
I
 1 View
66 SNORA75 XMRV
I
 1 View
67 SNORD37 XMRV
I
 1 View
68 ST7-OT4 XMRV
I
 1 View
69 STAT3 XMRV
I
 1 View
70 TANGO6 XMRV
I
 1 View
71 TES XMRV
I
 1 View
72 TFEC XMRV
I
 1 View
73 TKTL1 XMRV
I
 1 View
74 TXN2 XMRV
I
 1 View
75 WDR91 XMRV
I
 1 View
76 ZDHHC18 XMRV
I
 1 View
Contents Description and
Data Download
Table Note
I
Target gene is affected by virus integration.
M
Target gene is associated with the virus gene/protein/region.
E
Target gene is detected in the expression profiling data.
S
Target gene is detected in the single-cell transcriptome data.
C
Target gene is detected in the genome binding/occupancy profiling data.
M
Target gene is detected in the methylation profiling data.
F
Target gene provides figures to visualize the analysis results.
F indicates that this gene has visualization results on at least one type of sequencing data.