HIV Target gene Detail Information

> ASH1L Gene Search Result


Gene Information
Gene Name ASH1L
Gene ID 55870
Gene Full Name ASH1 like histone lysine methyltransferase
Gene Alias ASH1|ASH1L1|KMT2H|MRD52
Transcripts ENSG00000116539
Virus HIV
Gene Type protein-coding
HPA Location Info Nucleoplasm, Golgi apparatus;
Membrane Info Disease related genes, Enzymes, Human disease related genes, Metabolic proteins, Potential drug targets, Predicted intracellular proteins
Uniport_ID Q9NR48
HGNC ID HGNC:19088
OMIM ID 607999
Summary This gene encodes a member of the trithorax group of transcriptional activators. The protein contains four AT hooks, a SET domain, a PHD-finger motif, and a bromodomain. It is localized to many small speckles in the nucleus, and also to cell-cell tight junctions. [provided by RefSeq, Jul 2008]
Target gene [ASH1L] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000504 chr1 379 29 8 416 View
4001087 chr1 26 155 36 217 View
4002752 chr1 71 10 0 81 View
4002790 chr1 0 80 0 80 View
4004792 chr1 38 1 0 39 View
4005658 chr1 16 14 0 30 View
4005777 chr1 28 1 0 29 View
4005996 chr1 27 1 0 28 View
4006214 chr1 13 10 3 26 View
4006731 chr1 18 4 1 23 View
4006775 chr1 1 21 1 23 View
4006809 chr1 21 0 1 22 View
4007489 chr1 18 1 0 19 View
4008591 chr1 2 12 0 14 View
4008991 chr1 0 13 0 13 View
4009191 chr1 12 0 0 12 View
4009434 chr1 7 4 0 11 View
4009435 chr1 4 7 0 11 View
4009509 chr1 10 1 0 11 View
4011167 chr1 6 1 0 7 View
4011500 chr1 6 0 0 6 View
4011511 chr1 4 2 0 6 View
4013273 chr1 4 0 0 4 View
4014065 chr1 1 0 1 2 View
4014116 chr1 1 1 0 2 View

Target gene [ASH1L] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE221688 		Chip-seq;scATAC-Seq;scRNA-Seq 12 Illumina NovaSeq 6000 (Homo sapiens)
GSE99737 RNA-seq 9 Illumina HiSeq 2500 (Homo sapiens)
GSE144332 RNA-seq 75 NextSeq 550 (Homo sapiens)
GSE157829 scRNA-seq 7 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE165705 		Chip-seq 30 Illumina NovaSeq 6000 (Homo sapiens)
GSE164264 RNA-seq 6 BGISEQ-500 (Homo sapiens)
GSE262621 RNA-seq 70 Illumina NovaSeq 6000 (Homo sapiens)
GSE202410 scRNA-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE128121 RNA-seq 16 Illumina HiSeq 4000 (Homo sapiens)
GSE162914 RNA-seq 211 Illumina HiSeq 2500 (Homo sapiens)
GSE187515 scRNA-seq 104 Illumina MiSeq (Homo sapiens);Illumina HiSeq 4000 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE279982 Methylation profiling (Array) 576 Infinium MethylationEPIC
C
  GSE144329 		ATAC-seq 96 NextSeq 550 (Homo sapiens)
GSE205204 RNA-seq 14 Illumina NovaSeq 6000 (Homo sapiens)
GSE125686 RNA-seq 62 Illumina HiSeq 2000 (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
GSE233747 scRNA-seq 40 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE220859 		Chip-seq 11 Illumina NovaSeq 6000 (Homo sapiens)
GSE165708 RNA-seq 100 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE211651 		Chip-seq;RNA-seq;PRO-seq 39 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE198809 scRNA-seq 46 Illumina NovaSeq 6000 (Homo sapiens)
GSE68028 MeDIP-chip 1 NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100929_HG19_Deluxe_Prom_Meth_HX1]
C
  GSE100376 		ATAC-seq 24 Illumina NextSeq 500 (Homo sapiens)
GSE167211 RNA-seq 1 Illumina HiSeq 2000 (Homo sapiens)
GSE165132 RNA-seq 56 NextSeq 550 (Homo sapiens)
GSE228078 scRNA-seq 12 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100266 		ATAC-seq;Chip-seq;RNA-seq 32 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE165703 		ATAC-seq 82 Illumina HiSeq 4000 (Homo sapiens)
GSE246082 RNA-seq 6 Illumina HiSeq 4000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE221688 - ASH1L peak across samples

Peak Plot

> Dataset: GSE165705 - ASH1L peak across samples

Peak Plot

> Dataset: GSE144329 - ASH1L peak across samples

Peak Plot

> Dataset: GSE220859 - ASH1L peak across samples

Peak Plot

> Dataset: GSE211651 - ASH1L peak across samples

Peak Plot

> Dataset: GSE100376 - ASH1L peak across samples

Peak Plot

> Dataset: GSE100266 - ASH1L peak across samples

Peak Plot

> Dataset: GSE165703 - ASH1L peak across samples

Peak Plot