Gene Name	GPATCH8
Gene ID	23131
Gene Full Name	G-patch domain containing 8
Gene Alias	GPATC8|KIAA0553
Transcripts	ENSG00000186566
Virus	HIV
Gene Type	protein-coding
HPA Location Info	Nuclear speckles;Mitochondria;
Membrane Info	Plasma proteins, Predicted intracellular proteins
Uniport_ID	Q9UKJ3
HGNC ID	HGNC:29066
OMIM ID	614396
Summary	The protein encoded by this gene contains an RNA-processing domain, a zinc finger domain, a lysine-rich region and a serine-rich region. A mutation in the serine-rich region of the protein is thought to be associated with hyperuricemia (PMID: 21594610). Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Feb 2015]

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4003125	chr17	65	4	0	69	View
4003821	chr17	54	0	0	54	View
4004100	chr17	29	20	0	49	View
4005384	chr17	18	7	8	33	View
4006335	chr17	20	5	0	25	View
4007088	chr17	5	16	0	21	View
4007663	chr17	15	3	0	18	View
4008043	chr17	16	0	0	16	View
4008641	chr17	14	0	0	14	View
4010408	chr17	7	2	0	9	View
4010841	chr17	7	1	0	8	View
4011457	chr17	5	2	0	7	View
4011504	chr17	4	2	0	6	View
4011715	chr17	4	2	0	6	View
4012153	chr17	2	3	0	5	View
4012649	chr17	2	1	1	4	View
4012738	chr17	3	1	0	4	View
4013631	chr17	0	3	0	3	View
4014272	chr17	2	0	0	2	View
4015060	chr17	0	1	0	1	View

Data ID	Experiment type	Sample number	Platform
C   GSE221688	Chip-seq;scATAC-Seq;scRNA-Seq	12	Illumina NovaSeq 6000 (Homo sapiens)
GSE99737	RNA-seq	9	Illumina HiSeq 2500 (Homo sapiens)
GSE144332	RNA-seq	75	NextSeq 550 (Homo sapiens)
GSE157829	scRNA-seq	7	Illumina HiSeq 2500 (Homo sapiens)
C   GSE165705	Chip-seq	30	Illumina NovaSeq 6000 (Homo sapiens)
GSE164264	RNA-seq	6	BGISEQ-500 (Homo sapiens)
C   GSE30738	Chip-seq	2	Illumina Genome Analyzer II (Homo sapiens)
GSE262621	RNA-seq	70	Illumina NovaSeq 6000 (Homo sapiens)
GSE202410	scRNA-seq	24	Illumina HiSeq 4000 (Homo sapiens)
GSE128121	RNA-seq	16	Illumina HiSeq 4000 (Homo sapiens)
GSE162914	RNA-seq	211	Illumina HiSeq 2500 (Homo sapiens)
GSE279982	Methylation profiling (Array)	576	Infinium MethylationEPIC
C   GSE144329	ATAC-seq	96	NextSeq 550 (Homo sapiens)
GSE205204	RNA-seq	14	Illumina NovaSeq 6000 (Homo sapiens)
GSE125686	RNA-seq	62	Illumina HiSeq 2000 (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
GSE233747	scRNA-seq	40	Illumina NovaSeq 6000 (Homo sapiens)
C   GSE220859	Chip-seq	11	Illumina NovaSeq 6000 (Homo sapiens)
GSE165708	RNA-seq	100	Illumina HiSeq 4000 (Homo sapiens)
C   GSE211651	Chip-seq;RNA-seq;PRO-seq	39	Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE68028	MeDIP-chip	1	NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100929_HG19_Deluxe_Prom_Meth_HX1]
C   GSE100376	ATAC-seq	24	Illumina NextSeq 500 (Homo sapiens)
GSE167211	RNA-seq	1	Illumina HiSeq 2000 (Homo sapiens)
GSE165132	RNA-seq	56	NextSeq 550 (Homo sapiens)
GSE228078	scRNA-seq	12	Illumina NovaSeq 6000 (Homo sapiens)
C   GSE100266	ATAC-seq;Chip-seq;RNA-seq	32	Illumina HiSeq 2500 (Homo sapiens)
C   GSE165703	ATAC-seq	82	Illumina HiSeq 4000 (Homo sapiens)
GSE246082	RNA-seq	6	Illumina HiSeq 4000 (Homo sapiens)

• Genome binding/occupancy profiling

When the gene can detect a peak in the dataset, a peak plot will be displayed.

> Dataset: GSE221688 - GPATCH8 peak across samples

Peak Plot

> Dataset: GSE165705 - GPATCH8 peak across samples

Peak Plot

> Dataset: GSE30738 - GPATCH8 peak across samples

Peak Plot

> Dataset: GSE144329 - GPATCH8 peak across samples

Peak Plot

> Dataset: GSE220859 - GPATCH8 peak across samples

Peak Plot

> Dataset: GSE211651 - GPATCH8 peak across samples

Peak Plot

> Dataset: GSE100376 - GPATCH8 peak across samples

Peak Plot

> Dataset: GSE100266 - GPATCH8 peak across samples

Peak Plot

> Dataset: GSE165703 - GPATCH8 peak across samples

Peak Plot