HIV Target gene Detail Information

> ARIH2 Gene Search Result


Gene Information
Gene Name ARIH2
Gene ID 10425
Gene Full Name ariadne RBR E3 ubiquitin protein ligase 2
Gene Alias ARI2|TRIAD1
Transcripts ENSG00000177479
Virus HIV
Gene Type protein-coding
HPA Location Info Nucleoplasm;
Membrane Info Enzymes, Predicted intracellular proteins
Uniport_ID O95376
HGNC ID HGNC:690
OMIM ID 605615
Summary The protein encoded by this gene is an E3 ubiquitin-protein ligase that polyubiquitinates some proteins, tagging them for degradation. The encoded protein upregulates p53 in some cancer cells and may inhibit myelopoiesis. Several transcript variants encoding different isoforms have been found for this gene, although the full-length nature of some of them have not been determined yet. [provided by RefSeq, Nov 2015]
Target gene [ARIH2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000559 chr3 200 65 106 371 View
4000950 chr3 65 94 82 241 View
4000972 chr3 57 86 93 236 View
4001237 chr3 146 19 25 190 View
4001598 chr3 53 36 59 148 View
4002586 chr3 54 19 15 88 View
4002712 chr3 56 26 1 83 View
4002755 chr3 38 37 6 81 View
4010743 chr3 7 1 0 8 View
4011249 chr3 3 0 4 7 View
4011326 chr3 6 1 0 7 View
4015372 chr3 0 1 0 1 View

Target gene [ARIH2] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE221688
Chip-seq;scATAC-Seq;scRNA-Seq 12 Illumina NovaSeq 6000 (Homo sapiens)
GSE99737 RNA-seq 9 Illumina HiSeq 2500 (Homo sapiens)
GSE144332 RNA-seq 75 NextSeq 550 (Homo sapiens)
GSE157829 scRNA-seq 7 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE165705
Chip-seq 30 Illumina NovaSeq 6000 (Homo sapiens)
GSE164264 RNA-seq 6 BGISEQ-500 (Homo sapiens)
C
  GSE30738
Chip-seq 2 Illumina Genome Analyzer II (Homo sapiens)
GSE262621 RNA-seq 70 Illumina NovaSeq 6000 (Homo sapiens)
GSE202410 scRNA-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE128121 RNA-seq 16 Illumina HiSeq 4000 (Homo sapiens)
GSE162914 RNA-seq 211 Illumina HiSeq 2500 (Homo sapiens)
GSE279982 Methylation profiling (Array) 576 Infinium MethylationEPIC
C
  GSE144329
ATAC-seq 96 NextSeq 550 (Homo sapiens)
GSE205204 RNA-seq 14 Illumina NovaSeq 6000 (Homo sapiens)
GSE125686 RNA-seq 62 Illumina HiSeq 2000 (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
GSE198339 scRNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE233747 scRNA-seq 40 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE220859
Chip-seq 11 Illumina NovaSeq 6000 (Homo sapiens)
GSE165708 RNA-seq 100 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE211651
Chip-seq;RNA-seq;PRO-seq 39 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE198809 scRNA-seq 46 Illumina NovaSeq 6000 (Homo sapiens)
GSE68028 MeDIP-chip 1 NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100929_HG19_Deluxe_Prom_Meth_HX1]
C
  GSE100376
ATAC-seq 24 Illumina NextSeq 500 (Homo sapiens)
GSE167211 RNA-seq 1 Illumina HiSeq 2000 (Homo sapiens)
GSE165132 RNA-seq 56 NextSeq 550 (Homo sapiens)
GSE228078 scRNA-seq 12 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100266
ATAC-seq;Chip-seq;RNA-seq 32 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE165703
ATAC-seq 82 Illumina HiSeq 4000 (Homo sapiens)
GSE246082 RNA-seq 6 Illumina HiSeq 4000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE221688 - ARIH2 peak across samples

Peak Plot


> Dataset: GSE165705 - ARIH2 peak across samples

Peak Plot


> Dataset: GSE30738 - ARIH2 peak across samples

Peak Plot


> Dataset: GSE144329 - ARIH2 peak across samples

Peak Plot


> Dataset: GSE220859 - ARIH2 peak across samples

Peak Plot


> Dataset: GSE211651 - ARIH2 peak across samples

Peak Plot


> Dataset: GSE100376 - ARIH2 peak across samples

Peak Plot


> Dataset: GSE100266 - ARIH2 peak across samples

Peak Plot


> Dataset: GSE165703 - ARIH2 peak across samples

Peak Plot