HIV Target gene Detail Information

> ATF7IP Gene Search Result


Gene Information
Gene Name ATF7IP
Gene ID 55729
Gene Full Name activating transcription factor 7 interacting protein
Gene Alias AM|ATF-IP|ATF7IP1|MCAF|MCAF1|p621
Transcripts ENSG00000171681
Virus HIV
Gene Type protein-coding
HPA Location Info Nucleoplasm, Nuclear bodies;
Membrane Info Predicted intracellular proteins
Uniport_ID Q6VMQ6
HGNC ID HGNC:20092
OMIM ID 613644
Summary ATF7IP is a multifunctional nuclear protein that associates with heterochromatin. It can act as a transcriptional coactivator or corepressor depending upon its binding partners (summary by Liu et al., 2009 [PubMed 19106100]).[supplied by OMIM, Nov 2010]
Target gene [ATF7IP] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4001831 chr12 118 10 0 128 View
4003602 chr12 20 3 35 58 View
4003692 chr12 52 4 0 56 View
4004559 chr12 16 11 15 42 View
4005222 chr12 28 7 0 35 View
4006004 chr12 24 4 0 28 View
4006005 chr12 24 4 0 28 View
4007185 chr12 14 6 0 20 View
4007293 chr12 19 1 0 20 View
4008135 chr12 11 5 0 16 View
4009645 chr12 11 0 0 11 View
4009900 chr12 5 5 0 10 View
4010278 chr12 7 2 0 9 View
4012544 chr12 5 0 0 5 View
4012702 chr12 4 0 0 4 View
4014352 chr12 2 0 0 2 View
4015954 chr12 0 0 0 0 View
4015955 chr12 0 0 0 0 View
4016576 chr12 0 0 0 0 View
4016748 chr12 0 0 0 0 View

Target gene [ATF7IP] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE221688
Chip-seq;scATAC-Seq;scRNA-Seq 12 Illumina NovaSeq 6000 (Homo sapiens)
GSE99737 RNA-seq 9 Illumina HiSeq 2500 (Homo sapiens)
GSE144332 RNA-seq 75 NextSeq 550 (Homo sapiens)
GSE157829 scRNA-seq 7 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE165705
Chip-seq 30 Illumina NovaSeq 6000 (Homo sapiens)
GSE164264 RNA-seq 6 BGISEQ-500 (Homo sapiens)
C
  GSE30738
Chip-seq 2 Illumina Genome Analyzer II (Homo sapiens)
GSE262621 RNA-seq 70 Illumina NovaSeq 6000 (Homo sapiens)
GSE202410 scRNA-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE128121 RNA-seq 16 Illumina HiSeq 4000 (Homo sapiens)
GSE162914 RNA-seq 211 Illumina HiSeq 2500 (Homo sapiens)
GSE187515 scRNA-seq 104 Illumina MiSeq (Homo sapiens);Illumina HiSeq 4000 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE279982 Methylation profiling (Array) 576 Infinium MethylationEPIC
C
  GSE144329
ATAC-seq 96 NextSeq 550 (Homo sapiens)
GSE205204 RNA-seq 14 Illumina NovaSeq 6000 (Homo sapiens)
GSE125686 RNA-seq 62 Illumina HiSeq 2000 (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
GSE198339 scRNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE233747 scRNA-seq 40 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE220859
Chip-seq 11 Illumina NovaSeq 6000 (Homo sapiens)
GSE165708 RNA-seq 100 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE211651
Chip-seq;RNA-seq;PRO-seq 39 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE198809 scRNA-seq 46 Illumina NovaSeq 6000 (Homo sapiens)
GSE68028 MeDIP-chip 1 NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100929_HG19_Deluxe_Prom_Meth_HX1]
C
  GSE100376
ATAC-seq 24 Illumina NextSeq 500 (Homo sapiens)
GSE167211 RNA-seq 1 Illumina HiSeq 2000 (Homo sapiens)
GSE165132 RNA-seq 56 NextSeq 550 (Homo sapiens)
GSE228078 scRNA-seq 12 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100266
ATAC-seq;Chip-seq;RNA-seq 32 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE165703
ATAC-seq 82 Illumina HiSeq 4000 (Homo sapiens)
GSE246082 RNA-seq 6 Illumina HiSeq 4000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE221688 - ATF7IP peak across samples

Peak Plot


> Dataset: GSE165705 - ATF7IP peak across samples

Peak Plot


> Dataset: GSE30738 - ATF7IP peak across samples

Peak Plot


> Dataset: GSE144329 - ATF7IP peak across samples

Peak Plot


> Dataset: GSE220859 - ATF7IP peak across samples

Peak Plot


> Dataset: GSE211651 - ATF7IP peak across samples

Peak Plot


> Dataset: GSE100376 - ATF7IP peak across samples

Peak Plot


> Dataset: GSE100266 - ATF7IP peak across samples

Peak Plot


> Dataset: GSE165703 - ATF7IP peak across samples

Peak Plot