HIV Target gene Detail Information

> DIP2A Gene Search Result


Gene Information
Gene Name DIP2A
Gene ID 23181
Gene Full Name disco interacting protein 2 homolog A
Gene Alias C21orf106|DIP2
Transcripts ENSG00000160305
Virus HIV
Gene Type protein-coding
HPA Location Info Nucleoplasm;
Membrane Info Enzymes, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q14689
HGNC ID HGNC:17217
OMIM ID 607711
Summary The protein encoded by this gene may be involved in axon patterning in the central nervous system. This gene is not highly expressed. Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Mar 2009]
Target gene [DIP2A] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4001663 chr21 6 66 71 143 View
4002230 chr21 94 3 6 103 View
4002771 chr21 79 2 0 81 View
4002794 chr21 78 2 0 80 View
4002874 chr21 75 2 0 77 View
4002875 chr21 75 2 0 77 View
4003194 chr21 9 44 14 67 View
4003335 chr21 62 2 0 64 View
4003425 chr21 61 1 0 62 View
4003569 chr21 58 1 0 59 View
4003667 chr21 56 1 0 57 View
4004013 chr21 33 2 16 51 View
4004239 chr21 1 46 0 47 View
4004268 chr21 32 1 14 47 View
4004535 chr21 42 1 0 43 View
4005015 chr21 37 0 0 37 View
4005016 chr21 32 0 5 37 View
4005337 chr21 32 0 2 34 View
4005338 chr21 32 0 2 34 View
4005339 chr21 32 0 2 34 View
4005340 chr21 34 0 0 34 View
4005433 chr21 33 0 0 33 View
4006999 chr21 17 4 0 21 View
4007377 chr21 17 2 0 19 View
4008085 chr21 14 2 0 16 View
4008242 chr21 14 2 0 16 View
4008543 chr21 9 3 3 15 View
4009753 chr21 4 4 3 11 View
4010316 chr21 9 0 0 9 View
4011743 chr21 4 2 0 6 View
4012651 chr21 4 0 0 4 View
4014205 chr21 2 0 0 2 View
4015660 chr21 1 0 0 1 View
4016005 chr21 0 0 0 0 View
4016826 chr21 31 0 0 31 View

Target gene [DIP2A] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE221688 		Chip-seq;scATAC-Seq;scRNA-Seq 12 Illumina NovaSeq 6000 (Homo sapiens)
GSE99737 RNA-seq 9 Illumina HiSeq 2500 (Homo sapiens)
GSE144332 RNA-seq 75 NextSeq 550 (Homo sapiens)
GSE157829 scRNA-seq 7 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE165705 		Chip-seq 30 Illumina NovaSeq 6000 (Homo sapiens)
GSE164264 RNA-seq 6 BGISEQ-500 (Homo sapiens)
C
  GSE30738 		Chip-seq 2 Illumina Genome Analyzer II (Homo sapiens)
GSE262621 RNA-seq 70 Illumina NovaSeq 6000 (Homo sapiens)
GSE202410 scRNA-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE128121 RNA-seq 16 Illumina HiSeq 4000 (Homo sapiens)
GSE162914 RNA-seq 211 Illumina HiSeq 2500 (Homo sapiens)
GSE187515 scRNA-seq 104 Illumina MiSeq (Homo sapiens);Illumina HiSeq 4000 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE279982 Methylation profiling (Array) 576 Infinium MethylationEPIC
C
  GSE144329 		ATAC-seq 96 NextSeq 550 (Homo sapiens)
GSE205204 RNA-seq 14 Illumina NovaSeq 6000 (Homo sapiens)
GSE125686 RNA-seq 62 Illumina HiSeq 2000 (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
S
  GSE198339 		scRNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE233747 scRNA-seq 40 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE220859 		Chip-seq 11 Illumina NovaSeq 6000 (Homo sapiens)
GSE165708 RNA-seq 100 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE211651 		Chip-seq;RNA-seq;PRO-seq 39 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE198809 scRNA-seq 46 Illumina NovaSeq 6000 (Homo sapiens)
GSE68028 MeDIP-chip 1 NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100929_HG19_Deluxe_Prom_Meth_HX1]
C
  GSE100376 		ATAC-seq 24 Illumina NextSeq 500 (Homo sapiens)
GSE167211 RNA-seq 1 Illumina HiSeq 2000 (Homo sapiens)
GSE165132 RNA-seq 56 NextSeq 550 (Homo sapiens)
GSE228078 scRNA-seq 12 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100266 		ATAC-seq;Chip-seq;RNA-seq 32 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE165703 		ATAC-seq 82 Illumina HiSeq 4000 (Homo sapiens)
GSE246082 RNA-seq 6 Illumina HiSeq 4000 (Homo sapiens)


When the query gene is differentially changed in the dataset, a feature/violin plot will be displayed.


> Dataset: GSE198339 - Gene expression in cell subsets